msbayes

msBayes uses hierarchical approximate Bayesian computation (HABC) for comparative (multi-taxa) phylogeographic inference. HABC allows testing hypotheses and estimating hyper-parameters that quantify levels and patterns of congruence across co-distributed taxon-pairs in divergence/colonization times and/or categorical biogeographic histories. Contributors = Isaac Overcast, Wen Huang, Yan Qi, Naoki TakebayashiEli Stahl, Xiaoou Xie and Mike Hickerson

Multi taxa/ Multi Locus msBayes – MTML-MSBAYES (with rate heterogeneity across loci)
Available Here

MTML-MSBAYES Manual

MTML-MSBAYES Installation

 

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